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MI7.1-5 | Respiratory Tract Infections — Glossary

Glossary — MI7.1-5 | Respiratory Tract Infections

Key terms in this module. Tap a term to see its definition.

ABPA

Allergic Bronchopulmonary Aspergillosis; hypersensitivity reaction to Aspergillus antigen in asthmatic patients; central bronchiectasis; elevated IgE

Acid-fast bacillus (AFB)

Organism that retains carbol fuchsin dye after acid-alcohol decolourisation due to mycolic acid in cell wall; characteristic of mycobacteria

Antigenic drift

Accumulation of point mutations in influenza HA or NA genes causing minor antigenic changes; responsible for seasonal influenza epidemics

Antigenic shift

Major antigenic change in influenza due to reassortment of gene segments between human and animal strains; responsible for influenza pandemics

Aspergilloma

Fungal ball formed by Aspergillus species growing in a pre-existing pulmonary cavity (e.g., old TB); presents with haemoptysis; not invasive

Atypical pneumonia

Pneumonia caused by organisms without a cell wall (Mycoplasma) or intracellular pathogens (Legionella, Chlamydophila); presents with dry cough, bilateral infiltrates; does not respond to beta-lactams

Bacitracin disc (A disc)

Used to presumptively identify GAS; a zone of inhibition around the A disc indicates sensitivity, differentiating GAS from other streptococci

BAL (bronchoalveolar lavage)

Bronchoscopic procedure instilling then aspirating saline into distal airways; samples alveolar space; gold standard specimen for PCP, Aspergillus, and atypical pneumonia in immunocompromised

CBNAAT/GeneXpert MTB/RIF

Cartridge-Based Nucleic Acid Amplification Test; detects MTB DNA and rifampicin resistance within 2 hours; WHO-endorsed first-line TB diagnostic

Centor score

Clinical scoring system (fever, tonsillar exudate, lymphadenopathy, absence of cough) to assess probability of GAS pharyngitis and guide antibiotic use

Cold agglutinins

IgM antibodies that agglutinate RBCs at 4°C; elevated in Mycoplasma pneumoniae infection (>1:64); non-specific but useful bedside test

Community-acquired pneumonia (CAP)

Pneumonia acquired outside hospital or within 48 hours of admission; S. pneumoniae is the most common bacterial cause

Cord factor

Trehalose dimycolate; surface glycolipid of MTB; causes serpentine cord arrangement on culture; inhibits phagosome-lysosome fusion in macrophages

Diphtheria antitoxin (DAT)

Equine-derived antitoxin that neutralises circulating diphtheria exotoxin; must be given on clinical suspicion before culture confirmation

DOTS

Directly Observed Treatment, Short-course; WHO/NI-KSHAY strategy where a health worker observes each dose to ensure adherence; cornerstone of TB control

Downey cells

Atypical lymphocytes (activated CD8+ T cells) seen on peripheral blood smear in EBV infectious mononucleosis; large, irregular nucleus with abundant cytoplasm

Elek's gel precipitation test

In vitro immunodiffusion test to detect diphtheria toxin; a precipitation arc forms between toxigenic strain and antitoxin-impregnated filter paper strip

Galactomannan

Polysaccharide cell wall component of Aspergillus; detected in serum or BAL by ELISA as a marker of invasive aspergillosis

Ghon complex

Primary TB complex: Ghon focus (subpleural parenchymal lesion) + ipsilateral hilar lymph node calcification; result of primary TB infection

GMS stain

Gomori Methenamine Silver stain; stains fungal cell walls black; used to demonstrate Pneumocystis, Aspergillus, and other fungi in tissue/BAL

Halo sign

CT chest finding in early invasive aspergillosis: area of consolidation surrounded by ground-glass haze (haemorrhagic infarction around angioinvasive fungus)

Hospital-acquired pneumonia (HAP)

Pneumonia occurring ≥48 hours after hospital admission; associated with Gram-negative bacilli (Pseudomonas, Acinetobacter) and MRSA

ICAM-1

Intercellular adhesion molecule-1; serves as the rhinovirus receptor on upper respiratory epithelial cells

Loeffler's serum slope

Enriched medium for primary isolation of C. diphtheriae; promotes rapid growth and metachromatic granule formation for early identification

Lowenstein-Jensen (LJ) medium

Egg-based solid medium for MTB culture; growth in 3–8 weeks as rough, buff, cauliflower-like colonies

M protein

Major virulence factor of GAS; anti-phagocytic; antibodies cross-react with cardiac myosin causing rheumatic fever (molecular mimicry)

MDR-TB

Multi-Drug Resistant TB; defined as resistance to at least isoniazid AND rifampicin; requires second-line regimen for ≥18 months

Metachromatic granules

Volutin granules in C. diphtheriae that stain blue-black with Albert stain due to stored polyphosphate; pathognomonic of Corynebacterium on smear

MGIT

Mycobacteria Growth Indicator Tube; fluorescence-based liquid medium for rapid MTB culture; detects growth in 10–14 days

NI-KSHAY (formerly RNTCP)

National Tuberculosis Elimination Programme of India; provides free DOTS therapy, GeneXpert testing, nutritional support (Nikshay Poshan Yojana), and mandates case notification

Paul-Bunnell test

Serological test detecting heterophile IgM antibodies in EBV infectious mononucleosis; these antibodies agglutinate sheep/horse red blood cells

Pneumocystis jirovecii

Atypical fungus causing PCP in immunocompromised hosts; cannot be cultured; diagnosed by GMS stain of BAL showing helmet-shaped cysts

Pseudomembrane

Grayish-white adherent membrane on tonsillar/pharyngeal/laryngeal mucosa in diphtheria; composed of fibrin, dead epithelial cells, bacteria and leucocytes; bleeds on removal

PYR test

Pyrrolidonyl arylamidase test; positive in GAS (S. pyogenes) and Enterococcus; used to differentiate GAS from other β-haemolytic streptococci

Rhinocerebral mucormycosis

Angioinvasive fungal infection of sinuses extending to orbit and brain, caused by Mucorales; associated with uncontrolled diabetes and immunosuppression

Rhinosporidiosis

Chronic granulomatous infection of nasal mucosa caused by Rhinosporidium seeberi; endemic in south India; presents as nasal polyps with sporangia on histology

Stuart's transport medium

Semi-solid medium used for transport of throat swabs and other specimens; maintains organism viability without allowing multiplication during transit

Superantigen

Microbial protein (e.g., streptococcal pyrogenic exotoxin) that cross-links MHC II on APCs with Vβ region of TCR, causing massive polyclonal T-cell activation and cytokine storm

Tellurite medium

Selective medium (e.g., Hoyle's or CTBA) for isolation of C. diphtheriae; potassium tellurite inhibits other flora; diphtheria colonies appear grey-black

ZN (Ziehl-Neelsen) stain

Acid-fast stain using hot carbol fuchsin, acid-alcohol decolouriser, and methylene blue counterstain; AFB appear red on blue background

Β-haemolysis

Complete lysis of red blood cells around a colony on blood agar, producing a clear zone; characteristic of GAS (S. pyogenes)

41 terms in this module