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MI4.5-6 | Food Poisoning & Acid-Peptic Disease (H. pylori) — SDL Guide (Part 2)

Helicobacter pylori — Aetiology & Pathogenesis of APD

Helicobacter pylori is a Gram-negative, microaerophilic, spiral/curved rod (helix-shaped), 3–5 µm long, with multiple unipolar sheathed flagella and a characteristic urease activity so powerful it is the basis of nearly every diagnostic test.

Epidemiology: Prevalence in India — ~60–80% of asymptomatic adults; ~90–95% of duodenal ulcer patients. Acquisition typically in childhood via gastro-oral or faeco-oral route. Higher in lower socio-economic groups (shared water, crowded households).

Pathogenesis cascade:
1. Colonisation of antral gastric mucosa: urease splits urea → NH₃ → buffers the acid environment, enabling survival
2. Adhesins (BabA, SabA) bind Lewis b blood group antigen and sialyl-Lewis x on epithelium
3. CagA (cytotoxin-associated gene A) — injected via type IV secretion system → disrupts tight junctions, activates oncogenic signalling
4. VacA (vacuolating cytotoxin) — forms pores in epithelial cells → vacuolation → cell death
5. Neutrophil recruitment → IL-8 release → mucosal inflammation → chronic active gastritis
6. Increased acid secretion (↑gastrin from inflamed antrum, ↓somatostatin) → duodenal ulcer
7. Atrophic gastritis over decades → intestinal metaplasia → gastric cancer (IARC Group 1 carcinogen)

Diagram showing H. pylori colonization of gastric mucosa, urease-mediated acid buffering, CagA and VacA virulence mechanisms, and progression from gastritis to ulcer and gastric cancer.

Pathogenesis of Helicobacter pylori Infection

Panel A: Gastric lumen, mucus layer, gastric epithelial cells, H. pylori, flagella, urease, urea, ammonia buffer, local pH increase.. Panel B: CagA type IV secretion system, injected CagA, epithelial cell signaling, VacA toxin, membrane pore formation, cytoplasmic vacuoles, IL-8, neutrophil recruitment, chronic inflammation.. Panel C: Normal mucosa with colonization, chronic active gastritis, peptic ulcer, atrophic gastritis, intestinal metaplasia, dysplasia, gastric adenocarcinoma..

Laboratory Diagnosis of H. pylori

Diagnostic tests divide into invasive (require endoscopy + biopsy) and non-invasive:

Invasive (biopsy-based):

TestPrincipleNotes
Rapid Urease Test (CLO test)Urease splits urea → NH₃ → pH ↑ → colour change (yellow → pink/red) within 1 hMost widely used; 90% sensitivity
Histology (Giemsa/Warthin-Starry)Visualise curved rods on gastric epitheliumGold standard for tissue pathology
CultureMicroaerophilic (5–10% CO₂), 37°C, 3–7 days; Columbia blood agarReference; antibiotic sensitivity testing
PCRDetects cagA, vacA; clarithromycin resistance mutationsIncreasing use in refractory cases

Non-invasive:

TestPrincipleNotes
Urea Breath Test (UBT)Oral ¹³C- or ¹⁴C-urea → urease → labelled CO₂ in breathBest for post-treatment eradication check; 95% accuracy
Stool Antigen Test (HpSA)EIA detects H. pylori antigen in stoolAccuracy comparable to UBT; stop PPIs 2 weeks prior
Serology (IgG ELISA)Detects anti-H. pylori IgGCannot distinguish active vs. past infection; NOT for eradication check

Management: Triple therapy — PPI + clarithromycin + amoxicillin × 14 days (first-line in India where clarithromycin resistance <20%); quadruple therapy for clarithromycin-resistant strains.

SELF-CHECK

A 50-year-old man was successfully treated for H. pylori 4 weeks ago with triple therapy. The physician wants to confirm eradication. Which test is MOST appropriate at this stage?

A. IgG ELISA serology for H. pylori

B. Urea breath test (UBT) after stopping PPI for 2 weeks

C. Rapid urease test on antral biopsy

D. Serum gastrin level

Reveal Answer

Answer: B. Urea breath test (UBT) after stopping PPI for 2 weeks

The urea breath test (UBT) is the preferred non-invasive test for confirming H. pylori eradication as it detects active urease activity from live organisms. It should be performed at least 4 weeks after completing antibiotics and 2 weeks after stopping PPIs (which can suppress urease activity and cause false negatives). Serology (IgG ELISA) remains positive for months to years after eradication and is useless for post-treatment confirmation. Repeat endoscopy with rapid urease test is invasive and not first-line unless symptoms recur.

CLINICAL PEARL

The triple-threat of CagA: Not all H. pylori strains are equally virulent. Strains carrying the cagA gene (the 'pathogenicity island') cause more severe gastritis, higher ulcer rates, and a significantly elevated risk of gastric adenocarcinoma. CagA is injected directly into epithelial cells, where it activates the oncogenic Ras–ERK signalling pathway. CagA-positive strains predominate in East and South Asia—explaining the paradox of high H. pylori prevalence yet higher gastric cancer rates in Asian populations despite lower rates of smoking.